BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022B11LP1|AL427866
(479 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 936 0.0
>3x_Contig1782
Length = 24703
Score = 936 bits (470), Expect = 0.0
Identities = 474/477 (99%)
Strand = Plus / Minus
Query: 1 gtcactatgagtnacgccggtatgtcgatgagatccgacacttccaagttcttaaaagtt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7512 gtcactatgagtaacgccggtatgtcgatgagatccgacacttccaagttcttaaaagtt 7453
Query: 61 ggaaaggaaaagaagaacaacgcaagggctatccgtttgccaaagaaggaacttttggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7452 ggaaaggaaaagaagaacaacgcaagggctatccgtttgccaaagaaggaacttttggat 7393
Query: 121 ctattgttcaagttgtttgatgaatacgattattggtccttgaaaggtttgaaggagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7392 ctattgttcaagttgtttgatgaatacgattattggtccttgaaaggtttgaaggagaga 7333
Query: 181 acaagacaaccagaagcatatttaaaggaatcgctagatcaagttgctatgcttgtgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7332 acaagacaaccagaagcatatttaaaggaatcgctagatcaagttgctatgcttgtgaaa 7273
Query: 241 wagggtccgtatgccttgaaatatactttaaaatcggaatataaaaagttgaaggaagct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7272 aagggtccgtatgccttgaaatatactttaaaatcggaatataaaaagttgaaggaagct 7213
Query: 301 gaaagagctgctacgcttggtgaattggcacaacacgctgatccagaacaacagcagcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7212 gaaagagctgctacgcttggtgaattggcacaacacgctgatccagaacaacagcagcag 7153
Query: 361 attcaagaccaatttgatcaacaacaacaacaggagaacgagcmagaggaggaagacttg 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7152 attcaagaccaatttgatcaacaacaacaacaggagaacgagcaagaggaggaagacttg 7093
Query: 421 gaagacgtggaaatggaggatgtgttgtagaacccttcaaacatagtatatatatat 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7092 gaagacgtggaaatggaggatgtgttgtagaacccttcaaacatagtatatatatat 7036
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7331
Number of Sequences: 1807
Number of extensions: 7331
Number of successful extensions: 450
Number of sequences better than 1.0e-20: 1
length of query: 479
length of database: 10,358,551
effective HSP length: 16
effective length of query: 463
effective length of database: 10,329,639
effective search space: 4782622857
effective search space used: 4782622857
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)